AMBER Archive (2009)

Subject: Re: [AMBER] Suggestion for restraining chain of a protein

From: Carlos Simmerling (carlos.simmerling_at_gmail.com)
Date: Tue May 05 2009 - 07:27:05 CDT


both are technically ok, but which should be done depends on what you
are trying to learn, which we do not know.

On 5/5/09, nicholus bhattacharjee <nicholusbhattacharjee_at_gmail.com> wrote:
> But which one is more advisable, simulating the whole protein or simulating
> the chain separately? Please let me know.
>
> Nicholus Bhattacharjee
> PhD Scholar
> Department of Chemistry
> University of Delhi
> Delhi-110007 (INDIA)
> Phone: 9873098743(M)
> _______________________________________________
> AMBER mailing list
> AMBER_at_ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>

-- 
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Carlos L. Simmerling, Ph.D.
Professor, Department of Chemistry
CMM Bldg, Room G80           Phone: (631) 632-1336   Fax: 632-1555
Stony Brook University           E-mail: carlos.simmerling_at_gmail.com
Stony Brook, NY 11794-5115 Web: http://comp.chem.sunysb.edu
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