AMBER Archive (2009)

Subject: Re: [AMBER] Metal in MD simulation

From: Bill Ross (
Date: Thu Mar 19 2009 - 16:22:12 CDT

> I am interested in including Cu+ or Zn metal in the peptide simulation.

This paper may be of interest:

    Ion-Induced Stabilization of the G-DNA Quadruplex: Free Energy
    Perturbation Studies. W.S. Ross and C.C. Hardin
    Journal of the American Chemical Society 116, 6070 (1994).


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