AMBER Archive (2009)

Subject: [AMBER] error in constructing DNA from nucgen

From: Pansy Patel (
Date: Tue Mar 17 2009 - 13:43:49 CDT


I am trying to construct an AB DNA hexamer using nucgen:

nucgen -i -o nuc.out -d $AMBERHOME/dat/leap/parm/nucgen.dat -p nuc.pdb
but I get the following error:
Unit 6 Error on OPEN: nuc.out
Can somebody please tell me what it means and how I can get it to work ?


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