AMBER Archive (2009)

Subject: [AMBER] Regarding leap

From: aneesh cna (
Date: Wed Mar 04 2009 - 05:43:52 CST

Dear amber users,
                I am using amber 9.0 for simulation. I would like to add
some organic molecules in a cubic box by keeping my protein of interest at
the center of box, just like what 'solvetbox' command doing in leap with
water molecules.But instead of water I would like to add organic molecules.
Can anyone suggest me how to do this in amber?

Thanks in advance
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