AMBER Archive (2009)

Subject: Re: AMBER: error in amber 10

From: David A. Case (
Date: Tue Jan 06 2009 - 06:18:23 CST

On Tue, Jan 06, 2009, archana sonawani wrote:
> Following steps were performed.
> 1] Downloaded and extracted Amber10 and Amber tools in /usr/local.
> 2] Downloaded and extracted g95 in root and then the path was set.
> wget -O - |tar xvfz -
> ln -s $PWD/g95-install/bin/i686-pc-linux-gnu-g95 /usr/bin/g95
> 3] Running g95 didnt gave any error.
> 4] Following commands were given in "sh unix shell"
> AMBERHOME=" /usr/local/amber10"
> export AMBERHOME
> cd $AMBERHOME/src
> ./configure -static g95
> No error till this step.

The above command should have exited immediately with an error message.
Amber10 is configured with "configure_at" and "configure_amber". The
"configure" script itself doesn't do anything except print a help message
and exit.

> Further steps of installation were carried out as given in the Amber 10 m
> When i am trying to start Xleap shows (xleap) file not found error.
> In /usr/local/Amber10/exe/ does not have xleap file.

Looks like you never installed AmberTools(?). xleap is a part of that
package. Please see the instructions on p. 11 of the AmberTools Users'


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