AMBER Archive (2007)

Subject: AMBER: restraining atoms

From: deepti nayar (deepti.icgeb_at_gmail.com)
Date: Sun May 13 2007 - 23:39:15 CDT

hi all
 Thank you thomas for th ehelp. I have one more doubt.

In my simulation , although I am able t restrain atoms but it seems to me as
if only first group of atoms is bein restrained and not all. can somebody
clear my doubt whether only first group of atoms, following thr restrain
command gets fixed or all?

I have attached my input script and i feel as if only 10-20 atoms are
restrained and not 25,26,28-38 atoms.

any sugguestions are welcome

with regards
deepti


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