AMBER Archive (2006)

Subject: AMBER: rdparm

From: venditti2_at_unisi.it
Date: Fri Dec 15 2006 - 10:08:17 CST


Dear list,
I have to strip out all the water hydrogens from my simulation. I did it
for the trajectory file but I don't understand the way to delete these
atoms in the topology file.
I tryied using the rdparm command, but I have just found a way to strip
the water molecules (using the stripwater option).
Have you any suggestion?
Many thanks in advance,
Vincenzo

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu