AMBER Archive (2006)

Subject: Re: AMBER: sander error about fortran

From: Scott Brozell (sbrozell_at_scripps.edu)
Date: Sat Dec 02 2006 - 01:10:03 CST

Hi,

On Fri, 1 Dec 2006, Shuting Wei wrote:

> I got error when i run mm_pbsa.pl, the error is from sander:
>
> At line 423 of file _rdparm.f
> Fortran runtime error: End of file
> /Users/Shuting/amber9/exe/sander -O -i sander_com.in -o
> sander_com.1.out -c ./testrun_Nmode_ABN_cmplx_1.crd_com.crd.1 -p
> ABN_1.prmtop not successful
>
> Attached the input files, I am using amber9 on Mac OS X Tiger, the
> compiler is gfortran.

Your attached prmtop is empty:

    0 -rw-r--r-- 1 scott scott 0 Nov 30 04:55 ABN_1.prmtop

This also smells like the source of your rdparm error.

Scott

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