AMBER Archive (2006)

Subject: Re: AMBER: Execution time discrepancies

From: Bill Ross (ross_at_cgl.ucsf.edu)
Date: Thu Aug 17 2006 - 20:24:13 CDT

> A user on our system made some test runs with Amber 8 and found
> significant (50%) discrepancies in the execution times of her code. The
> two runs used identical decks. Is there a programmatic reason why this
> happened?

Were these wallclock times? Were CPU times reported in .out files
off by the same amount as wallclock? Was the computer dedicated to
the calculation, or shared? What architecture?

Bill
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