AMBER Archive (2006)

Subject: AMBER: brookhaven to amber pdb format

From: AYTUG TUNCEL (ATUNCEL_at_ku.edu.tr)
Date: Wed Aug 02 2006 - 04:08:50 CDT

Hi all,

Is there any way to convert brookhaven PDB format to AMBER pdb format. Because hydrogen atoms are represented by different nomenclature. for ex:

in MET hydrogens of CG are represented by HG1 and HG2 but in AMBER format they are HG2 and HG3.

thanks for any help

Aytug

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