AMBER Archive (2006)

Subject: AMBER: OSX 10.4 G4 xlf90 compilation errors

From: K. Yarem (chemogan_at_yahoo.com)
Date: Mon Mar 27 2006 - 14:06:59 CST


We're attempting a serial Amber8 compilation on a single CPU G4 system with xlf90 (version 8.1) and the patched configure script (as described at http://amber.scripps.edu/macos.html). This is being undertaken within csh, rather than OSX's default tcsh. The config.h file was successfully created, and environment variables for Amber8 and the compiler have been set using a .cshrc file in the home directory.
 
 The following error messages are generated, and we're just looking for a little help in interpreting the errors (Thanks very much!):
 -----------------------------------------------
 Starting installation of Amber8 (serial) at Mon Mar 27 14:42:01 EST 2006.
 mkdir ../exe
 mkdir: ../exe: File exists
 make: [serial] Error 1 (ignored)
 cd lib; make install
 xlf90 -qextname=ddot:fdate:flush:lsame:dscal:dnrm2:idamax:drot:dswap:dspmv:daxpy:dspr2:dgemm:dcopy:dgemv:dtrmv:dtrmm:dger:lsame:dspev:dgeev:dspevd:dsyev:dppsv:dspsv:dlamch:dsteqr:dgeqr2:dorm2r:dlacpy:dlarnv:dlascl:dlaset:dlartg:dlanst:dlaev2:dlapy2:dlasr -o new2oldparm new2oldparm.o nxtsec.o
 /usr/bin/ld: new2oldparm.o bad magic number (not a Mach-O file)
 /usr/bin/ld: nxtsec.o bad magic number (not a Mach-O file)
 make[1]: *** [new2oldparm] Error 1
 make: *** [serial] Error 2
 -----------------------------------------------
 
                
---------------------------------
New Yahoo! Messenger with Voice. Call regular phones from your PC and save big.
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu