AMBER Archive (2006)

Subject: Re: AMBER: Parallel error in Amber 8

From: snoze pa (snoze.pa_at_gmail.com)
Date: Mon Feb 06 2006 - 17:18:16 CST

I also changed its location in the config.h file and everything is working.
But at the end it is not compiling sander.
I test this with both LAM and MPICH and both are giving me same error
message.

make[1]: o: Command not found
make[1]: [sander] Error 127 (ignored)
o sander.LES trace.o lmod.o decomp.o icosasurf.o egb.LES.o findmask.opb_force.o
sander.LES.o cshf.o noecalc.o noeread.o caldis.o calrate.o dinten.o drates.o
indexn.o kmat.o pearsn.o plane.o remarc.o nmrcal.LES.o nmrred.LES.o restal.o
getnat.o nmrnrg.o modwt.LES.o disnrg.o angnrg.o tornrg.o nmrprt.o nmrgrp.o
nmrcms.o nmrcmf.o impnum.o nmrsht.o at2res.o chklin.o opnmrg.o printe.o
runmin.o ndvprt.o force.LES.o rdparm.LES.o mdread.LES.o locmem.LES.o
runmd.LES.o getcor.o r6ave.LES.o r6drv.o aveint.o degcnt.LES.o corf.o
threeb.o tripl.o nmrrad.o decnvh.o fastwt.o echoin.o parallel.LES.o
jnrg.LES.o shake.o ene.LES.o mdwrit.o minrit.o set.o setmm.o dynlib.LES.o
mdfil.o nmlsrc.o ew_force.LES.o ew_setup.o ew_box.o ew_bspline.o ew_fft.o
ew_direct.LES.o ew_recip.LES.o pcshift.o align.o rstack.o istack.o rfree.o
rgroup.o random.o lsqfit.o amopen.o egb_les.LES.o debug.o ew_recip_reg.o
ew_handle_dips.o ew_dipole_recip.o mexit.o new_time.o extra_pts.LES.o
thermo_int.o matinv.o assert.o mmtsb.o mmtsb_client.o erfcfun.o veclib.o
mdm.o pb_init.o constantph.o prn_dipoles.o \
        ../lmod/lmod.a -L/lam/lib -llammpio -llamf77mpi -lmpi -llam -laio
-laio -lutil -ldl -L/usr/local/inte/mkl/8.0.1//lib/32 -lvml -lmkl_lapack64
-lmkl -lguide -lpthread \
        ../lapack/lapack.a ../blas/blas.a ../lib/nxtsec.o ../lib/sys.a
make[1]: o: Command not found
 make[1]: [sander.LES] Error 127 (ignored)
 /bin/mv sander sander.LES ../../exe
 /bin/mv: cannot stat `sander': No such file or directory
 /bin/mv: cannot stat `sander.LES': No such file or directory
 make[1]: *** [parallel] Error 1
make[1]: Leaving directory `/amber8/src/sander'
make: *** [parallel] Error 2

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