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AMBER Archive (2005)Subject: Re: AMBER: ambpdb TER problems
From: Sam (samuel.arey_at_epfl.ch)
David A. Case wrote:
>Can you post the "protein.pdb" file? Do you have the same TER card problem
Indeed, it turns out that the ambpdb-misplacement of TER card
An xleap "check" of the solvated structure does not reveal any
I have temporarily posted the following files for xleap manipulation
http://lcbcpc21.epfl.ch/Group_members/sam/omc.top
http://lcbcpc21.epfl.ch/Group_members/sam/leaprc
http://lcbcpc21.epfl.ch/Group_members/sam/protein.pdb
http://lcbcpc21.epfl.ch/Group_members/sam/frcmod.FS4
http://lcbcpc21.epfl.ch/Group_members/sam/frcmod.8OG
http://lcbcpc21.epfl.ch/Group_members/sam/anti-8OG.prep
http://lcbcpc21.epfl.ch/Group_members/sam/CYG.lib
http://lcbcpc21.epfl.ch/Group_members/sam/FS4ox.lib
Thanks for your help --
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