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AMBER Archive (2005)Subject: AMBER: Alignment tensor and Interia tensor
From: RadhaKumari Yadav (radha_kumariy_at_rediffmail.com)
Dear All,
When I did residual dipolar refinement using sander there are two lines in output like: "Diagonalize the alignment matrix" and "Diagonalize the moment of interia tensor". I am bit confused about this. According to me alignment tensor should be same as Inertia tensor. Can anyone clarify my doubt.
Thanks in advance,
Radha
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