AMBER Archive (2005)

Subject: Re: AMBER: params for cofactors

From: Michael Dolan (mdolan_at_tripos.com)
Date: Mon Aug 29 2005 - 15:23:10 CDT

I do see:

http://pharmacy.man.ac.uk/amber/

Michael Dolan wrote:
>
> Hi Ambers,
>
> I'd like to assemble a collection of cofactors having AMBER atom types
> and charges. Has anyone done a rigorous qm calculation for any of the
> following?:
>
> cAMP, cGMP, porphin, ADP, GDP, ATP<GTP, protophorphyrinIX, heme, NAD,
> NADP, FAD, FADhH, others? Where might parameter sets to use?
>
> Thank you,
>
> Mike
>
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