AMBER Archive (2005)

Subject: Re: AMBER: Amber 8: all_nucleic94.lib nucleotide geometry

From: Bill Ross (ross_at_cgl.ucsf.edu)
Date: Wed Aug 17 2005 - 18:04:49 CDT


> Why wouldn't completely planar structures be used in these
> library files?

Because usually people perform simulations on these structures,
and these are not so sensitive to initial conditions. Also they
may have been derived from X-ray coords. Or they might be an
artifact.

Bill
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