AMBER Archive (2005)

Subject: Re: AMBER: P4 EM64T Intel Fortran Compile Problem

From: Dawei Zhang (dawei.zhang.53_at_gmail.com)
Date: Fri Jul 15 2005 - 15:54:39 CDT


Dear Ross,

The 32bit versions of the math libraries was not installed. All the
math libraries are in the /usr/lib64/. What can I do?

Thank you,
dawei

On 7/15/05, Ross Walker <ross_at_rosswalker.co.uk> wrote:
> Do you have the 32bit versions of the math libraries installed?
>
> Check for /usr/lib/libm.a
>
> All the best
> Ross
>
> /\
> \/
> |\oss Walker
>
> | Department of Molecular Biology TPC15 |
> | The Scripps Research Institute |
> | Tel: +1 858 784 8889 | EMail:- ross_at_rosswalker.co.uk |
> | http://www.rosswalker.co.uk | PGP Key available on request |
>
> Note: Electronic Mail is not secure, has no guarantee of delivery, may not
> be ready every day, and should not be used for urgent or sensitive issues.
>
> > -----Original Message-----
> > From: owner-amber_at_scripps.edu
> > [mailto:owner-amber_at_scripps.edu] On Behalf Of Dawei Zhang
> > Sent: Friday, July 15, 2005 10:05
> > To: amber_at_scripps.edu
> > Subject: AMBER: P4 EM64T Intel Fortran Compile Problem
> >
> > Dear Amber users,
> >
> > I am trying to compile amber8 in 32-bit mode on a p4 intel EM64T
> > machine with RHEL WS v3.0 , using ./configure -p4 -static -ifort. And
> > the compilation died just in the beginning.
> >
> > **************************************************************
> > ****************************************
> > Starting installation of Amber8 (serial) at Fri Jul 15
> > 12:54:13 EDT 2005.
> > mkdir ../exe
> > mkdir: cannot create directory `../exe': File exists
> > make: [serial] Error 1 (ignored)
> > cd lib; make install
> > make[1]: Entering directory `/usr/local/amber8/src/lib'
> > cpp -traditional -P -I/usr/local/amber8/src/include new2oldparm.f >
> > _new2oldparm.f
> > ifort -c -w95 -tpp7 -mp1 -O0 -o new2oldparm.o _new2oldparm.f
> > cpp -traditional -P -I/usr/local/amber8/src/include nxtsec.f
> > > _nxtsec.f
> > ifort -c -w95 -tpp7 -mp1 -O0 -o nxtsec.o _nxtsec.f
> > ifort -static -o new2oldparm new2oldparm.o nxtsec.o
> > ld: skipping incompatible /usr/lib64/libm.a when searching for -lm
> > ld: cannot find -lm
> > make[1]: *** [new2oldparm] Error 1
> > make[1]: Leaving directory `/usr/local/amber8/src/lib'
> > make: *** [serial] Error 2
> > **************************************************************
> > ***************************************
> >
> > It seems like ld is the source of the trouble. Does anybody
> > help me out?
> >
> > Thank you,
> >
> > Dr. Dawei Zhang
> > Department of Biochemistry
> > New York University School of Medicine
> > --------------------------------------------------------------
> > ---------
> > The AMBER Mail Reflector
> > To post, send mail to amber_at_scripps.edu
> > To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu
> >
>
>
> -----------------------------------------------------------------------
> The AMBER Mail Reflector
> To post, send mail to amber_at_scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu
>

-- 
Dr. Dawei Zhang
Department of Biochemistry
New York University School of Medicine
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu