AMBER Archive (2005)

Subject: AMBER: Make Distance restraints for non-standard residues

From: gtg549i_at_mail.gatech.edu
Date: Fri Jun 10 2005 - 10:47:41 CDT


Dear Amber users,

I try to use the "makeDIST_RST", but it give me the following info:

> makeDIST_RST -upb 7col.dist -pdb compl_cP3.pdb -rst RST.dist
# makeDIST_RST
Currently configured for up to 5000 atoms
Using MAP file /usr/local/amber8/dat/map.DG-AMBER
ERROR no map function for H70 BE2 :data= 1 BE2 H70 2 MAA O6
3.0

I guess this is because my residues are not standard residues (BE2 and MAA are
two organic molecules). Attachment is my pdb and dist file. How can i solve
this problem? thanks a lot!

Shuting





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