AMBER Archive (2005)

Subject: AMBER: substitute missing residues?

From: Wai Keat Yam (yamwaikeat_at_yahoo.com)
Date: Fri Jun 10 2005 - 03:20:29 CDT


Dear all,

Hello there.

I have a macro system that I need to simulate which
has approximately 100 missing residues. However, I am
only interested in one spesific site at the end of my
simulations. So, my question is do I need to
substitute all of the missing residues? All of the
missing residues are not at the site, or near the site
that I am interested in.

Thanks a lot.

Regards,
Yam

                
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