AMBER Archive (2005)

Subject: Fwd: Re: AMBER: AMBER Test

From: Anthony Cruz (acb15885_at_uprm.edu)
Date: Tue May 03 2005 - 07:25:46 CDT


Thank you for you prompt response. I forgot to tell that I have applied the
bugfix.all to the source... what could be the problem???
I have AMBER 8.

---------- Forwarded Message ----------

Subject: Re: AMBER: AMBER Test
Date: Tuesday 26 April 2005 10:12 am
From: David Case <case_at_scripps.edu>
To: amber_at_scripps.edu

On Tue, Apr 26, 2005, Anthony Cruz wrote:
> cd nonper; ./Run.cap
> diffing mdout.cap.save with mdout.cap
> possible FAILURE: check mdout.cap.dif
>
>
> acruz_at_tccg5:~/amber/amber8/test/nonper> more mdout.cap.dif
> 76c76
> < Etot = -3409.9453 EKtot = 2056.0343 EPtot =
> -5465.9796
> ---
>
> > Etot = -3404.4787 EKtot = 2056.0343 EPtot =
>
> -5460.5130

Please see bugfix.43.

> cd pb_pgb; ./Run.pbpgb
> diffing mdout.pbpgb.save with mdout.pbpgb
> possible FAILURE: check mdout.pbpgb.dif
>
>
> acruz_at_tccg5:~/amber/amber8/test/pb_pgb> more mdout.pbpgb.dif
> 66c66
> < Etot = -14371.5201 EKtot = 3870.9870 EPtot =
> -18242.5071
> ---
>
> > Etot = -14329.6226 EKtot = 3870.9870 EPtot =
>
> -18200.6096

This looks like the same problem, but I don't see a bugfix for it. The error
is innocuous.

...dac

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