AMBER Archive (2005)

Subject: Re: AMBER: Formatting Questions

From: Kara Di Giorgio (kdigiorgio_at_sbcglobal.net)
Date: Mon Feb 21 2005 - 20:03:37 CST


Thanks. I'll take a look at that tutorial.

Kara

On Feb 21, 2005, at 5:33 PM, David A. Case wrote:

> On Mon, Feb 21, 2005, Kara Di Giorgio wrote:
>
>> I'm trying to format a smallish organometallic compound. It contains a
>> crown-ether-like organic portion surrounding a Nickel atom. It has
>> nitrogen atoms in the crown coordinating with the Nickel.
>
> It's not clear whether you have looked at the crown ether tutorial:
>
> http://amber.scripps.edu/tutorial/crown_ether/index.html
>
> Even though you have a different ligand and a different metal ion, the
> principles should be the same. You will mostly have to do things on
> your own
> here: antechamber might help for the ligand, but it won't know anything
> about the metal ion.
>
> ...dac
>
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