AMBER Archive (2005)

Subject: Re: AMBER: running shell scripts in tleap?

From: John Bushnell (bushnell_at_ultra.chem.ucsb.edu)
Date: Mon Feb 14 2005 - 17:32:32 CST


I think you just need to write a csh/bash/whatever script
that writes a tleap script. Then you can just run the
resulting script through tleap with something like:

  tleap -f my_tleap_script -s

That should do it - John

On Mon, 14 Feb 2005, Cenk Andac wrote:

> Dear amber community,
>
> I was wondering if it is possible to run C or Bash
> shell scripts in tleap to do a variety of hundreds of
> things on a single ligand. For instance, I would like
> to rotate a dihedral angle about 360 degrees by
> incrementing the torsion angle at 1 degree intervals
> and saving a pdb file for each increment.
>
>
> Best regards,
>
>
> Jenk
>

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu