AMBER Archive (2005)

Subject: AMBER: Tutorial Request

From: Kara Di Giorgio (kdigiorgio_at_sbcglobal.net)
Date: Sun Feb 06 2005 - 11:01:15 CST


Are there any other Antechamber tutorials (other than for Sustiva)?
Maybe one that covers creating a residue with a head/tail (ie amino
acid-like or DNA-like). I've read in the manual you can use prepgen
and a mainchain file to describe which atoms are to be deleted, etc.
Is there an example or tutorial I could follow to better understand it?

Thanks,

Kara Di Giorgio
University of the Pacific

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