AMBER Archive (2005)

Subject: Re: AMBER: skip snapshots with ptraj in amber 8.0

From: Guanglei Cui (cuigl_at_csb.sunysb.edu)
Date: Mon Jan 31 2005 - 16:19:27 CST

Hi,

You can do it like this

trajin _mdcrd_ 1 999999 100
trajout _pdb_ pdb nowrap
go

See ptraj manual for details.

Guanglei

Eric Hu wrote:
> Hi I cannot seem to find the way to write a pdb file
> from the trajectory for example at every 100th step
> with patrj. Carnal can do this with a keyword WIN.
>
> Thanks.
> Eric
>
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