AMBER Archive (2003)

Subject: AMBER: non-zero 10-12 coefficient

From: Bimo Ario Tejo (bimo7_at_gmx.de)
Date: Sat Dec 13 2003 - 08:44:49 CST


Dear Amber users,

I tried to do a sander simulation (minimization, heating, equilibration,
production) of a glycoprotein using Amber7 with parameter files taken from
Robert Woods' group (http://glycam.ccrc.uga.edu/glycam/glycam_parameters.html):
resp 010 and glycam_2000a.dat. The .lib files of sugar groups and prmtop and
prmcrd were prepared using xleap -f leaprc.ff99.

However, the simulation was stopped at minimization stage with this error
message in output file:

Found a non-zero 10-12 coefficient, but source
was not compiled with -DHAS_10_12.
If you are using a pre-1994 force field, you
will need to re-compile with this flag.

I dont think I'm using a pre-1994 ff. Does anyone have some experience how
to use glycam ff in Amber7?

Best regards,
Bimo

-- 
+++ GMX - die erste Adresse für Mail, Message, More +++
Neu: Preissenkung für MMS und FreeMMS! http://www.gmx.net

----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to amber_at_scripps.edu To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu