AMBER Archive (2003)

Subject: Re: AMBER: Re: Nmode problem

From: Wu Yingliang (wuyliang_at_public.wh.hb.cn)
Date: Mon Dec 01 2003 - 07:34:40 CST

Dear Dr. Holger Gohlke,

Thanks a lot for your kind help!

Here, sinece I am not a experienced AMBER user, would you like to tell me how to recompile and reinstall nmode individually without changing other AMBER7.0 modules?

Looking forward to your help once more!

Thank you very much in advance!

Best wishes,

Wu Yingliang

        

>------------------------------------------------------------------
>Hi,
>
>you need to increase the parameter MAXMEMX in sizes.h in
>$AMBERHOME/src/nmode (at least) to the value given below:
>
>> Total memory required : 20855890 real words
>
>Then recompile and reinstall nmode. This should alleviate the problems
>with nmode.
>
>With respect to the "Illegal character in prototype ..." messages: this
>is due to new rules as to define function prototypes in perl versions
>higher than 5. The only workaround I know here is to run mm_pbsa with a
>perl version that starts with "5....".
>
>Best regards
>
>Holger
>
 
                                 
　　　　　　　　Wu Yingliang
　　　　　　　　wuyliang_at_public.wh.hb.cn
　　　　　　　　　　2003-12-01

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