AMBER Archive (2003)

Subject: Re: AMBER: Pseudouridine force field parameters

From: David A. Case (case_at_scripps.edu)
Date: Sat Nov 29 2003 - 18:48:59 CST


On Sat, Nov 29, 2003, Peter Gannett wrote:
>
> Does anyone have a set of force field parameters for psuedouridine? Or,
> can someone point me to where I might find them? I admit I have not
> searched long and hard but a cursory search did not turn up much useful.

Go to http://amber.scripps.edu, then to the "contributed parameters" link.
There you will find "modified bases that appear in tRNA-phe", which has
a "PSU" (pseudouridine) residue.

..good luck...dac

-- 

================================================================== David A. Case | e-mail: case_at_scripps.edu Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896 The Scripps Research Institute | phone: +1-858-784-9768 10550 N. Torrey Pines Rd. | home page: La Jolla CA 92037 USA | http://www.scripps.edu/case ================================================================== ----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to amber_at_scripps.edu To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu