AMBER Archive (2003)

Subject: AMBER: infinitely long DNA & moil-view?

From: Endres, Robert G. (endresrg_at_ornl.gov)
Date: Tue Oct 14 2003 - 13:57:43 CDT

Dear Amber users,

I have two questions:

1) is it possible to do simulations of a truely periodic DNA molecule? Looking
at the DNA tutorial it seems that the DNA has a only a finite oligomer, solvated in a periodic box.

2) I tried to obtain the latest version of Moil-view (9.1. ?), but could
not access the proper web pages or links from AMBER home page.

Any suggestions welcome!

Robert

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