AMBER Archive (2003)

Subject: Re: AMBER: constant pressure in GB

From: David Case (case_at_scripps.edu)
Date: Thu Oct 02 2003 - 06:53:32 CDT


On Wed, Oct 01, 2003, aini_at_UMDNJ.EDU wrote:
>
> Is it possible to have constant pressure (e.g. 1 atm) in GB simulation?

There is no concept of external pressure in these implicit solvent models...
The "water" is assumed to be at 1 atm pressure. The pressure printed as
"zero" means "no pressure" not "zero pressure".

...dac

-- 

================================================================== David A. Case | e-mail: case_at_scripps.edu Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896 The Scripps Research Institute | phone: +1-858-784-9768 10550 N. Torrey Pines Rd. | home page: La Jolla CA 92037 USA | http://www.scripps.edu/case ================================================================== ----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to amber_at_scripps.edu To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu