AMBER Archive (2003)

Subject: AMBER: C-alpha RMS

From: Do Anh Tuan (datuan_at_hcmuns.edu.vn)
Date: Sat Sep 20 2003 - 01:39:42 CDT

Dear Amber users
I am a new Amber user and running MD simulation for a protein (259 residues).
But I don't know how to create C-alpha RMSD report to analyze the output
results (ex: crd file). Can anybody help me on this?
Thanks in advance,

Do Anh Tuan

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Collaborative Bioinformatics Lab.
Laboratory of Molecular Biotechnology
University of Natural Sciences, VNU - HCMC
Add: 227 Nguyen Van Cu St., Dist. 5, HCMC, Vietnam
e-mail: datuan_at_hcmuns.edu.vn

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