AMBER Archive (2003)

Subject: Re: AMBER: performance vs number of processors

From: David A. Case (case_at_scripps.edu)
Date: Mon Sep 15 2003 - 14:53:32 CDT


On Mon, Sep 15, 2003, GUILLERMINA L ESTIU wrote:
>
> I am running amber7 in the pittsburg supercomputer center. (HP Alphaserver
> Cluster comprising 750 4-processor compute nodes) Does anyone have previous
> experience on the best performance of sander (amber7) vs number of
> processors?

There are some benchmark numbers for the "lemieux" machine at the Amber web
site: http://amber.scripps.edu; you can also check

    http://www.scripps.edu/brooks/Benchmarks/

for others. Don't know if this is what you need or not....

..dac

-- 

================================================================== David A. Case | e-mail: case_at_scripps.edu Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896 The Scripps Research Institute | phone: +1-858-784-9768 10550 N. Torrey Pines Rd. | home page: La Jolla CA 92037 USA | http://www.scripps.edu/case ================================================================== ----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to amber_at_scripps.edu To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu