AMBER Archive (2003)Subject: Re: AMBER: Non-standard Residue
From: David A. Case (case_at_scripps.edu)
Date: Tue Jul 22 2003 - 16:06:50 CDT
On Tue, Jul 22, 2003, Ran Ye wrote:
> cobre07 9% antechamber -fi pdb -fo gzmat -i
> 1CAG-am.pdb -o 1CAG-am.gau
>
> Unrecognized atomic name , exitBus error (core dumped)
We need to see what is in the 1CAG-am.pdb file. Antechamber is not all that
robust in handling bad input, but somehow it thinks you have a blank atom
name....you could look at your pdb file to see if anything is funny; otherwise
you will have to post it.
..regards...dac
--
==================================================================
David A. Case | e-mail: case_at_scripps.edu
Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
The Scripps Research Institute | phone: +1-858-784-9768
10550 N. Torrey Pines Rd. | home page:
La Jolla CA 92037 USA | http://www.scripps.edu/case
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