AMBER Archive (2003)

Subject: Re: viewing movie with VMD

From: Lepsa (lepsik_at_marilyn.uochb.cas.cz)
Date: Mon Jun 23 2003 - 03:09:29 CDT

Hi Layi,
you can use VMD 1.8 to view your movies. Load topology first (parm7) and
then coordinates (crd or crdbox, whichever is your case) to the same
molecule (not as a new one)!

Hope this helps,

Martin
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----
Martin Lepsik, PhD student            Phone:  +420/2/20183-540, Fax:
+420/2/20183-292
Dept. of Theor Chem & Center for Complex molecular Systems and Biomolecules
Institute of Organic Chemistry and Biochemistry (IOCB)
Flemingovo nam 2,
Czech Academy of Sciences,
166 10, Prague 6,
Czech Rep.
URL: www.uochb.cas.cz/~teochem
----- Original Message -----
From: "Layi Adekoya" <adekoya_at_fagmed.uit.no>
To: "amber-heimdal.compchem.ucsf.edu" <amber_at_heimdal.compchem.ucsf.edu>
Sent: Monday, June 23, 2003 10:00 AM
Subject: viewing movie with VMD

> Hi Guys,
> I am having problems using VMD to view
> the movies of my trajectories.
> I use AMBER7. what can I do?
> What other programe can I use for to view it
> if amber7 trajectory files are not compatible.
>
> Thanks for your help.
>
> Layi