AMBER Archive (2003)

Subject: GB model

From: MF Yang (nkvitamine_at_yahoo.com)
Date: Tue Jun 10 2003 - 14:54:33 CDT


Hi,
Here is a question about GB model. We chose igb=2, and
certainly,  no periodic boundary and no pressure
scaling are used. But if we used the temperature
scalling with ntt=1. Would there be any bad effect on
our simulation?
 
By the way, we are modelling a protein with 130
residues or so.
 
Your reply is greatly appreciated!
 
Best,
Ming

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