AMBER Archive (2003)

Subject: Description of ATOM type in GLYCAM

From: Peng Tao (ptao_at_chemistry.ohio-state.edu)
Date: Tue Apr 29 2003 - 14:14:52 CDT

Dear all,

I am trying to use GLYCAM in AMBER. I loaded the .prep and
glycam_2000a.dat into xleap. But my system is mycolic acid which can not
be recognized by GLYCAM force field correctly.

Now, I want to assign the atom
types manually in xleap. But I don't know how many atom types are there in
GLYCAM force field, and the meaning of each type. I couldn't find such
information anywhere.

I have to ask for help again!

Thanks for any help in advance.

Best regards,
Peng Tao