AMBER Archive (2003)Subject: Dummy-parameters in Amber?
From: meiselba (Heike.Meiselbach_at_organik.uni-erlangen.de)
Date: Thu Jan 23 2003 - 04:39:17 CST
Dear Ambers,
I want to calculate a FEP for a organic molecule. My question is, when I
perturb a "C" to nothing - what is the dummy? Is it DC or DH and how are
the bonds, angles an torsions for the dummys defined?
Thank you in advance,
Heike
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