AMBER Archive (2002)

Subject: Re: How can I get the correct residue number?

From: Bill Ross (photoriot_at_yahoo.com)
Date: Thu May 02 2002 - 15:38:24 CDT

The residue number showed by 'desc' is only useful
within leap - the order in the prmtop is the one that
other programs will see.

Savepdb pre-amber7 orders in its own unique way,
involving a descending sort of molecules by size.
(Which is why the amber7 savepdb is much faster.)

Bill Ross

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