AMBER Archive (2001)

Subject: box of water

From: Marcela Madrid (mmadrid_at_psc.edu)
Date: Wed May 16 2001 - 17:04:01 CDT

Hi,

I started a simulation of DNA in a box of water, after MD
the box does not have well defined walls, and it does not look
like a cubic box at all. I would like to know if this is normal.
thanks, marcela