AMBER Archive (2000)

Subject: NAMOT

From: J. Bryan Buckalew (jbbuckal_at_vcu.edu)
Date: Mon Sep 11 2000 - 15:18:49 CDT

Amber users:

I am having difficulty using NAMOT with Amber6. I cannot write a
parameter file in NAMOT. If I open my pdb file as an AMBER file. How
does it recognize the base pairing (using 1994 nucleic acids)?

Bryan B