AMBER Archive (2000)

Subject: LINMIN

From: Laila Abou Zeid (laila_at_linus.bmb.wright.edu)
Date: Tue Jul 11 2000 - 14:17:11 CDT


Hi Amber users
I have a large protein in box of water [10A], and during minimization I
got the following: .... RESTARTED DUE TO LINMIN FAILURE ...

please find the out put file attached.

My question:
1- what is the problem of linmin and how I can fix it?
2- what is the main reason to get : [********] ?

note: I am running AMBER5 and I have only one mutated residue in the used
enzyme

Thanks in advance

LAzeid