AMBER Archive (2000)

Subject: pdb files

From: Victor Pham (vqp2_at_cornell.edu)
Date: Thu May 11 2000 - 19:09:11 CDT

Dear Amber-users,
When saving a pdb file, leap prompts that the atoms order in the pdb file is
not the same as that in the prmtop file, and that the same order can be
achieved using genpbd along with the prmtop and inpcrd files. Can someone
please tell me how this can be done. Thanks.

VP

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Victor Quan Pham 158 Bard Hall
Cornell University Ithaca, NY 14853
Chemical Engineering Phone: (607)255-3615